Integrating Open Data on Cancer in Support to Tumor Growth Analysis

Fleur Jeanquartier; Claire Jean-Quartier; Tobias Schreck; David Cemernek; Andreas Holzinger

doi:10.1007/978-3-319-43949-5_4

Integrating Open Data on Cancer in Support to Tumor Growth Analysis

Fleur Jeanquartier^*, Claire Jean-Quartier, Tobias Schreck, David Cemernek, Andreas Holzinger

^*Korrespondierende/r Autor/-in für diese Arbeit

Publikation: Beitrag in Buch/Bericht/Konferenzband › Beitrag in einem Konferenzband › Begutachtung

Abstract

The general disease group of malignant neoplasms depicts one of the leading and increasing causes for death. The underlying complexity of cancer demands for abstractions to disclose an exclusive subset of information related to the disease. Our idea is to create a user interface for linking a simulation on cancer modeling to relevant additional publicly and freely available data. We are not only providing a categorized list of open datasets and queryable databases for the different types of cancer and related information, we also identify a certain subset of temporal and spatial data related to tumor growth. Furthermore, we describe the integration possibilities into a simulation tool on tumor growth that incorporates the tumor’s kinetics.

Originalsprache	englisch
Titel	Information Technology in Bio- and Medical Informatics. ITBAM 2016
Erscheinungsort	Cham
Herausgeber (Verlag)	Springer
Seiten	49-66
ISBN (Print)	978-3-319-43948-8
DOIs	https://doi.org/10.1007/978-3-319-43949-5_4
Publikationsstatus	Veröffentlicht - 10 Aug. 2016
Veranstaltung	7th International Conference on Information Technology in Bio- and Medical Informatics: ITBAM 2016 - Porto, Portugal Dauer: 5 Sept. 2016 → 8 Sept. 2016

Publikationsreihe

Name	Lecture Notes in Computer Science
Band	9832

Konferenz

Konferenz	7th International Conference on Information Technology in Bio- and Medical Informatics
Kurztitel	ITBAM 2016
Land/Gebiet	Portugal
Ort	Porto
Zeitraum	5/09/16 → 8/09/16

ASJC Scopus subject areas

Information systems

Fields of Expertise

Human- & Biotechnology

Treatment code (Nähere Zuordnung)

Basic - Fundamental (Grundlagenforschung)

UN SDGs

Dieser Output leistet einen Beitrag zu folgendem(n) Ziel(en) für nachhaltige Entwicklung

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10.1007/978-3-319-43949-5_4

integrating-open-data-tumor-growth-visualizationAkzeptiertes Autorenmanuskript, 1,48 MBLizenz: CC BY 4.0

Dieses zitieren

Integrating Open Data on Cancer in Support to Tumor Growth Analysis. / Jeanquartier, Fleur; Jean-Quartier, Claire; Schreck, Tobias et al.
Information Technology in Bio- and Medical Informatics. ITBAM 2016. Cham: Springer, 2016. S. 49-66 (Lecture Notes in Computer Science; Band 9832).

Publikation: Beitrag in Buch/Bericht/Konferenzband › Beitrag in einem Konferenzband › Begutachtung

Jeanquartier, F, Jean-Quartier, C, Schreck, T, Cemernek, D & Holzinger, A 2016, Integrating Open Data on Cancer in Support to Tumor Growth Analysis. in Information Technology in Bio- and Medical Informatics. ITBAM 2016. Lecture Notes in Computer Science, Bd. 9832, Springer, Cham, S. 49-66, 7th International Conference on Information Technology in Bio- and Medical Informatics, Porto, Portugal, 5/09/16. https://doi.org/10.1007/978-3-319-43949-5_4

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title = "Integrating Open Data on Cancer in Support to Tumor Growth Analysis",

abstract = "The general disease group of malignant neoplasms depicts one of the leading and increasing causes for death. The underlying complexity of cancer demands for abstractions to disclose an exclusive subset of information related to the disease. Our idea is to create a user interface for linking a simulation on cancer modeling to relevant additional publicly and freely available data. We are not only providing a categorized list of open datasets and queryable databases for the different types of cancer and related information, we also identify a certain subset of temporal and spatial data related to tumor growth. Furthermore, we describe the integration possibilities into a simulation tool on tumor growth that incorporates the tumor{\textquoteright}s kinetics.",

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author = "Fleur Jeanquartier and Claire Jean-Quartier and Tobias Schreck and David Cemernek and Andreas Holzinger",

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doi = "10.1007/978-3-319-43949-5_4",

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T1 - Integrating Open Data on Cancer in Support to Tumor Growth Analysis

AU - Jeanquartier, Fleur

AU - Jean-Quartier, Claire

AU - Schreck, Tobias

AU - Cemernek, David

AU - Holzinger, Andreas

PY - 2016/8/10

Y1 - 2016/8/10

N2 - The general disease group of malignant neoplasms depicts one of the leading and increasing causes for death. The underlying complexity of cancer demands for abstractions to disclose an exclusive subset of information related to the disease. Our idea is to create a user interface for linking a simulation on cancer modeling to relevant additional publicly and freely available data. We are not only providing a categorized list of open datasets and queryable databases for the different types of cancer and related information, we also identify a certain subset of temporal and spatial data related to tumor growth. Furthermore, we describe the integration possibilities into a simulation tool on tumor growth that incorporates the tumor’s kinetics.

AB - The general disease group of malignant neoplasms depicts one of the leading and increasing causes for death. The underlying complexity of cancer demands for abstractions to disclose an exclusive subset of information related to the disease. Our idea is to create a user interface for linking a simulation on cancer modeling to relevant additional publicly and freely available data. We are not only providing a categorized list of open datasets and queryable databases for the different types of cancer and related information, we also identify a certain subset of temporal and spatial data related to tumor growth. Furthermore, we describe the integration possibilities into a simulation tool on tumor growth that incorporates the tumor’s kinetics.

KW - Open Data

KW - health informatics

KW - cancer

KW - tumor growth

KW - data visualisation

KW - simulation

U2 - 10.1007/978-3-319-43949-5_4

DO - 10.1007/978-3-319-43949-5_4

M3 - Conference paper

SN - 978-3-319-43948-8

T3 - Lecture Notes in Computer Science

SP - 49

EP - 66

BT - Information Technology in Bio- and Medical Informatics. ITBAM 2016

PB - Springer

CY - Cham

T2 - 7th International Conference on Information Technology in Bio- and Medical Informatics

Y2 - 5 September 2016 through 8 September 2016

ER -

Integrating Open Data on Cancer in Support to Tumor Growth Analysis

Abstract

Publikationsreihe

Konferenz

ASJC Scopus subject areas

Fields of Expertise

Treatment code (Nähere Zuordnung)

UN SDGs

Zugriff auf Dokument

Fingerprint

Dieses zitieren