TY - JOUR
T1 - Structural dynamics of lytic polysaccharide monooxygenase during catalysis
AU - Filandr, Frantisek
AU - Kavan, Daniel
AU - Kracher, Daniel
AU - Laurent, Christophe V.F.P.
AU - Ludwig, Roland
AU - Man, Petr
AU - Halada, Petr
N1 - Funding Information:
Funding: Financial support from CSF (16-34818L) and the Austrian Science Fund (projects I 2385-N28, W1224 and J-4154) is gratefully acknowledged. Access to MS facilities was enabled through EU/MEYS support— CZ.1.05/1.1.00/02.0109; LQ1604 and LM2015043 CIISB. F.F. also acknowledges SVV260427/2019.
Publisher Copyright:
© 2020 by the authors. Licensee MDPI, Basel, Switzerland.
PY - 2020/2
Y1 - 2020/2
N2 - Lytic polysaccharide monooxygenases (LPMOs) are industrially important oxidoreductases employed in lignocellulose saccharification. Using advanced time-resolved mass spectrometric techniques, we elucidated the structural determinants for substrate-mediated stabilization of the fungal LPMO9C from Neurospora crassa during catalysis. LPMOs require a reduction in the active-site copper for catalytic activity. We show that copper reduction in NcLPMO9C leads to structural rearrangements and compaction around the active site. However, longer exposure to the reducing agent ascorbic acid also initiated an uncoupling reaction of the bound oxygen species, leading to oxidative damage, partial unfolding, and even fragmentation of NcLPMO9C. Interestingly, no changes in the hydrogen/deuterium exchange rate were detected upon incubation of oxidized or reduced LPMO with crystalline cellulose, indicating that the LPMO-substrate interactions are mainly side-chain mediated and neither affect intraprotein hydrogen bonding nor induce significant shielding of the protein surface. On the other hand, we observed a protective effect of the substrate, which slowed down the autooxidative damage induced by the uncoupling reaction. These observations further complement the picture of structural changes during LPMO catalysis.
AB - Lytic polysaccharide monooxygenases (LPMOs) are industrially important oxidoreductases employed in lignocellulose saccharification. Using advanced time-resolved mass spectrometric techniques, we elucidated the structural determinants for substrate-mediated stabilization of the fungal LPMO9C from Neurospora crassa during catalysis. LPMOs require a reduction in the active-site copper for catalytic activity. We show that copper reduction in NcLPMO9C leads to structural rearrangements and compaction around the active site. However, longer exposure to the reducing agent ascorbic acid also initiated an uncoupling reaction of the bound oxygen species, leading to oxidative damage, partial unfolding, and even fragmentation of NcLPMO9C. Interestingly, no changes in the hydrogen/deuterium exchange rate were detected upon incubation of oxidized or reduced LPMO with crystalline cellulose, indicating that the LPMO-substrate interactions are mainly side-chain mediated and neither affect intraprotein hydrogen bonding nor induce significant shielding of the protein surface. On the other hand, we observed a protective effect of the substrate, which slowed down the autooxidative damage induced by the uncoupling reaction. These observations further complement the picture of structural changes during LPMO catalysis.
KW - Hydrogen/deuterium exchange mass spectrometry
KW - Lignocellulose degradation
KW - Lytic polysaccharide monooxygenase
KW - Oxidative amino acid modification
KW - Peptide bond cleavage
KW - Reactive oxygen species
UR - http://www.scopus.com/inward/record.url?scp=85079080201&partnerID=8YFLogxK
U2 - 10.3390/biom10020242
DO - 10.3390/biom10020242
M3 - Article
C2 - 32033404
AN - SCOPUS:85079080201
SN - 2218-273X
VL - 10
JO - Biomolecules
JF - Biomolecules
IS - 2
M1 - 242
ER -