TY - JOUR
T1 - Complete genome sequence of Pseudomonas corrugata strain RM1-1-4, a stress protecting agent from the rhizosphere of an oilseed rape bait plant
AU - Zachow, Christin
AU - Müller, Henry
AU - Laireiter, Christina M.
AU - Tilcher, Ralf
AU - Berg, Gabriele
PY - 2017/11/9
Y1 - 2017/11/9
N2 - Pseudomonas corrugatastrain RM1-1-4 is a rhizosphere colonizer of oilseed rape. A previous study has shown that this motile, Gram-negative, non-sporulating bacterium is an effective stress protecting and biocontrol agent, which protects their hosts against abiotic and biotic stresses. Here, we announce and describe the complete genome sequence of P. corrugata RM1-1-4 consisting of a single 6.1 Mb circular chromosome that encodes 5189 protein coding genes and 85 RNA-only encoding genes. Genome analysis revealed genes predicting functions such as detoxifying mechanisms, stress inhibitors, exoproteases, lipoproteins or volatile components as well as rhizobactin siderophores and spermidine. Further analysis of its genome will help to identify traits promising for stress protection, biocontrol and plant growth promotion properties.
AB - Pseudomonas corrugatastrain RM1-1-4 is a rhizosphere colonizer of oilseed rape. A previous study has shown that this motile, Gram-negative, non-sporulating bacterium is an effective stress protecting and biocontrol agent, which protects their hosts against abiotic and biotic stresses. Here, we announce and describe the complete genome sequence of P. corrugata RM1-1-4 consisting of a single 6.1 Mb circular chromosome that encodes 5189 protein coding genes and 85 RNA-only encoding genes. Genome analysis revealed genes predicting functions such as detoxifying mechanisms, stress inhibitors, exoproteases, lipoproteins or volatile components as well as rhizobactin siderophores and spermidine. Further analysis of its genome will help to identify traits promising for stress protection, biocontrol and plant growth promotion properties.
KW - Biocontrol
KW - Detoxification systems
KW - Plant growth promotion
KW - Pseudomonas corrugata
KW - Rhizosphere of bait plant
KW - Sphagnum magellanicum-treated seeds
KW - Stress protection
UR - http://www.scopus.com/inward/record.url?scp=85034601083&partnerID=8YFLogxK
U2 - 10.1186/s40793-017-0278-7
DO - 10.1186/s40793-017-0278-7
M3 - Article
AN - SCOPUS:85034601083
SN - 1944-3277
VL - 12
JO - Standards in Genomic Sciences
JF - Standards in Genomic Sciences
IS - 1
M1 - 66
ER -