Training β -VAE by Aggregating a Learned Gaussian Posterior with a Decoupled Decoder

Jianning Li*, Jana Fragemann, Seyed Ahmad Ahmadi, Jens Kleesiek, Jan Egger

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference paperpeer-review

Abstract

The reconstruction loss and the Kullback-Leibler divergence (KLD) loss in a variational autoencoder (VAE) often play antagonistic roles, and tuning the weight of the KLD loss in β -VAE to achieve a balance between the two losses is a tricky and dataset-specific task. As a result, current practices in VAE training often result in a trade-off between the reconstruction fidelity and the continuity/disentanglement of the latent space, if the weight β is not carefully tuned. In this paper, we present intuitions and a careful analysis of the antagonistic mechanism of the two losses, and propose, based on the insights, a simple yet effective two-stage method for training a VAE. Specifically, the method aggregates a learned Gaussian posterior z∼ qθ(z| x) with a decoder decoupled from the KLD loss, which is trained to learn a new conditional distribution pϕ(x| z) of the input data x. Experimentally, we show that the aggregated VAE maximally satisfies the Gaussian assumption about the latent space, while still achieves a reconstruction error comparable to when the latent space is only loosely regularized by N(0, I). The proposed approach does not require hyperparameter (i.e., the KLD weight β ) tuning given a specific dataset as required in common VAE training practices. We evaluate the method using a medical dataset intended for 3D skull reconstruction and shape completion, and the results indicate promising generative capabilities of the VAE trained using the proposed method. Besides, through guided manipulation of the latent variables, we establish a connection between existing autoencoder (AE)-based approaches and generative approaches, such as VAE, for the shape completion problem. Codes and pre-trained weights are available at https://github.com/Jianningli/skullVAE.

Original languageEnglish
Title of host publicationMedical Applications with Disentanglements - First MICCAI Workshop, MAD 2022, Held in Conjunction with MICCAI 2022, Proceedings
EditorsJana Fragemann, Jianning Li, Jan Egger, Xiao Liu, Sotirios A. Tsaftaris, Jens Kleesiek
PublisherSpringer Science and Business Media Deutschland GmbH
Pages70-92
Number of pages23
ISBN (Print)9783031250453
DOIs
Publication statusPublished - 2023
Event1st MICCAI Workshop on Medical Applications with Disentanglements, held in conjunction with MICCAI 2022: MAD 2022 - Singapore, Singapore
Duration: 22 Sept 202222 Sept 2022

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume13823 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference1st MICCAI Workshop on Medical Applications with Disentanglements, held in conjunction with MICCAI 2022
Country/TerritorySingapore
CitySingapore
Period22/09/2222/09/22

Keywords

  • Disentanglement
  • Latent representation
  • Shape completion
  • Skull reconstruction
  • VAE

ASJC Scopus subject areas

  • Theoretical Computer Science
  • General Computer Science

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